Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1pzu
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain B and nucleic acid chain
T
| Protein |
Nucleic acid |
| 424 (Y) |
10 (T) |
| 427 (E) |
12 (C) |
| 520 (K) |
10 (T) |
| 523 (N) |
10 (T) |
| 538 (K) |
9 (T) |
Interactions between protein chain B and nucleic acid chain
W
| Protein |
Nucleic acid |
| 421 (R) |
5 (G) |
| 429 (S) |
2 (A) |
| 430 (R) |
4 (G) |
| 434 (K) |
3 (T) |
| 571 (Q) |
6 (A) |
| 664 (K) |
5 (G) |
| 665 (R) |
6 (A) |
Interactions between protein chain D and nucleic acid chain
T
| Protein |
Nucleic acid |
| 421 (R) |
6 (G) |
| 429 (S) |
3 (G) |
| 430 (R) |
5 (G) |
| 434 (K) |
4 (A) |
| 480 (T) |
2 (T) |
| 571 (Q) |
7 (A) |
Interactions between protein chain D and nucleic acid chain
W
| Protein |
Nucleic acid |
| 424 (Y) |
9 (T) |
| 427 (E) |
11 (C) |
| 520 (K) |
9 (T) |
| 523 (N) |
9 (T) |
| 538 (K) |
8 (A) |
Interactions between protein chain H and nucleic acid chain
V
| Protein |
Nucleic acid |
| 424 (Y) |
10 (T) |
| 427 (E) |
12 (C) |
| 520 (K) |
10 (T) |
| 523 (N) |
9 (T) |
| 523 (N) |
10 (T) |
| 538 (K) |
8 (A) |
Interactions between protein chain H and nucleic acid chain
Z
| Protein |
Nucleic acid |
| 421 (R) |
5 (G) |
| 429 (S) |
2 (A) |
| 430 (R) |
4 (G) |
| 571 (Q) |
6 (A) |
Interactions between protein chain I and nucleic acid chain
V
| Protein |
Nucleic acid |
| 421 (R) |
6 (G) |
| 429 (S) |
3 (G) |
| 430 (R) |
5 (G) |
| 571 (Q) |
7 (A) |
| 664 (K) |
7 (A) |
| 665 (R) |
7 (A) |
Interactions between protein chain I and nucleic acid chain
Z
| Protein |
Nucleic acid |
| 424 (Y) |
9 (T) |
| 427 (E) |
11 (C) |
| 520 (K) |
9 (T) |
| 523 (N) |
8 (A) |
| 523 (N) |
9 (T) |
| 538 (K) |
8 (A) |
Interactions between protein chain L and nucleic acid chain
X
| Protein |
Nucleic acid |
| 424 (Y) |
10 (T) |
| 426 (T) |
11 (T) |
| 427 (E) |
12 (C) |
| 520 (K) |
10 (T) |
| 523 (N) |
10 (T) |
| 538 (K) |
9 (T) |
Interactions between protein chain L and nucleic acid chain
Y
| Protein |
Nucleic acid |
| 421 (R) |
5 (G) |
| 429 (S) |
2 (A) |
| 430 (R) |
4 (G) |
| 434 (K) |
3 (T) |
| 571 (Q) |
6 (A) |
Interactions between protein chain M and nucleic acid chain
X
| Protein |
Nucleic acid |
| 421 (R) |
6 (G) |
| 429 (S) |
3 (G) |
| 430 (R) |
5 (G) |
| 434 (K) |
4 (A) |
| 571 (Q) |
7 (A) |
Interactions between protein chain M and nucleic acid chain
Y
| Protein |
Nucleic acid |
| 424 (Y) |
9 (T) |
| 427 (E) |
11 (C) |
| 520 (K) |
9 (T) |
| 523 (N) |
8 (A) |
| 523 (N) |
9 (T) |
| 538 (K) |
8 (A) |