Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1p7d
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
C
| Protein |
Nucleic acid |
| 136 (K) |
10 (C) |
| 139 (S) |
11 (T) |
| 176 (R) |
12 (T) |
| 177 (R) |
12 (T) |
| 198 (W) |
4 (T) |
| 235 (K) |
13 (T) |
| 275 (T) |
4 (T) |
| 281 (S) |
5 (G) |
| 284 (T) |
5 (G) |
| 346 (R) |
13 (T) |
Interactions between protein chain A and nucleic acid chain
D
| Protein |
Nucleic acid |
| 93 (K) |
28 (A) |
| 93 (K) |
29 (A) |
| 95 (K) |
30 (G) |
| 96 (T) |
28 (A) |
| 99 (N) |
28 (A) |
| 99 (N) |
29 (A) |
| 100 (Y) |
27 (A) |
| 144 (R) |
25 (A) |
| 214 (G) |
30 (G) |
| 286 (S) |
31 (T) |
| 287 (R) |
33 (G) |
| 293 (R) |
32 (T) |
| 294 (K) |
33 (G) |
| 306 (T) |
31 (T) |
| 308 (H) |
31 (T) |
| 333 (H) |
14 (T) |
| 334 (K) |
15 (T) |
| 340 (S) |
14 (T) |
Interactions between protein chain B and nucleic acid chain
E
| Protein |
Nucleic acid |
| 136 (K) |
10 (C) |
| 139 (S) |
11 (T) |
| 176 (R) |
12 (T) |
| 177 (R) |
12 (T) |
| 235 (K) |
13 (T) |
| 281 (S) |
5 (G) |
| 284 (T) |
5 (G) |
| 346 (R) |
13 (T) |
Interactions between protein chain B and nucleic acid chain
F
| Protein |
Nucleic acid |
| 90 (R) |
27 (A) |
| 93 (K) |
28 (A) |
| 93 (K) |
29 (A) |
| 95 (K) |
30 (G) |
| 96 (T) |
28 (A) |
| 99 (N) |
28 (A) |
| 99 (N) |
29 (A) |
| 100 (Y) |
27 (A) |
| 214 (G) |
30 (G) |
| 286 (S) |
31 (T) |
| 287 (R) |
33 (G) |
| 293 (R) |
32 (T) |
| 306 (T) |
31 (T) |
| 308 (H) |
31 (T) |
| 333 (H) |
14 (T) |
| 334 (K) |
15 (T) |
| 334 (K) |
16 (T) |
| 335 (S) |
15 (T) |
| 340 (S) |
14 (T) |