Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1nkp
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
F
| Protein |
Nucleic acid |
| 902 (K) |
105 (T) |
| 910 (E) |
108 (C) |
Interactions between protein chain A and nucleic acid chain
G
| Protein |
Nucleic acid |
| 903 (R) |
312 (T) |
| 906 (H) |
313 (G) |
| 914 (R) |
310 (C) |
| 914 (R) |
311 (G) |
| 939 (K) |
308 (C) |
| 939 (K) |
309 (A) |
Interactions between protein chain B and nucleic acid chain
F
| Protein |
Nucleic acid |
| 207 (H) |
113 (G) |
| 208 (N) |
112 (T) |
| 212 (R) |
111 (G) |
| 215 (R) |
110 (C) |
| 239 (R) |
108 (C) |
Interactions between protein chain B and nucleic acid chain
G
| Protein |
Nucleic acid |
| 206 (H) |
305 (T) |
| 211 (E) |
308 (C) |
Interactions between protein chain D and nucleic acid chain
H
| Protein |
Nucleic acid |
| 503 (R) |
612 (T) |
| 506 (H) |
613 (G) |
| 514 (R) |
610 (C) |
| 514 (R) |
611 (G) |
| 518 (K) |
609 (A) |
| 539 (K) |
609 (A) |
Interactions between protein chain D and nucleic acid chain
J
| Protein |
Nucleic acid |
| 510 (E) |
808 (C) |
| 513 (R) |
808 (C) |
Interactions between protein chain E and nucleic acid chain
H
| Protein |
Nucleic acid |
| 711 (E) |
608 (C) |
Interactions between protein chain E and nucleic acid chain
J
| Protein |
Nucleic acid |
| 704 (R) |
813 (G) |
| 707 (H) |
813 (G) |
| 712 (R) |
811 (G) |
| 715 (R) |
811 (G) |
| 739 (R) |
808 (C) |