Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1mow
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
B
| Protein |
Nucleic acid |
| 21 (D) |
314 (A) |
| 25 (Y) |
316 (T) |
| 30 (K) |
320 (G) |
| 33 (R) |
321 (G) |
| 43 (K) |
313 (A) |
| 43 (K) |
314 (A) |
| 76 (T) |
314 (A) |
| 77 (R) |
315 (G) |
| 77 (R) |
316 (T) |
| 130 (Y) |
303 (A) |
| 131 (K) |
302 (C) |
| 135 (Q) |
304 (A) |
| 165 (R) |
308 (G) |
| 167 (R) |
309 (T) |
| 178 (I) |
304 (A) |
| 213 (K) |
303 (A) |
| 236 (K) |
313 (A) |
Interactions between protein chain A and nucleic acid chain
C
| Protein |
Nucleic acid |
| 34 (S) |
402 (G) |
| 34 (S) |
403 (C) |
| 35 (E) |
404 (C) |
| 36 (Y) |
402 (G) |
| 37 (R) |
405 (G) |
| 37 (R) |
406 (G) |
| 68 (K) |
404 (C) |
| 75 (D) |
409 (C) |
| 81 (R) |
406 (G) |
| 85 (K) |
402 (G) |
| 85 (K) |
403 (C) |
| 117 (D) |
413 (A) |
| 119 (S) |
415 (A) |
| 123 (Q) |
417 (A) |
| 125 (K) |
418 (G) |
| 141 (Q) |
415 (A) |
| 145 (K) |
413 (A) |
| 167 (R) |
414 (G) |
| 195 (K) |
415 (A) |
| 233 (N) |
416 (C) |
| 234 (D) |
415 (A) |
| 235 (S) |
416 (C) |
| 239 (K) |
417 (A) |
| 240 (T) |
417 (A) |
Interactions between protein chain A and nucleic acid chain
F
| Protein |
Nucleic acid |
| 213 (K) |
901 (C) |
Interactions between protein chain D and nucleic acid chain
E
| Protein |
Nucleic acid |
| 521 (D) |
814 (A) |
| 525 (Y) |
816 (T) |
| 530 (K) |
820 (G) |
| 533 (R) |
821 (G) |
| 543 (K) |
813 (A) |
| 543 (K) |
814 (A) |
| 576 (T) |
814 (A) |
| 577 (R) |
815 (G) |
| 577 (R) |
816 (T) |
| 630 (Y) |
803 (A) |
| 631 (K) |
802 (C) |
| 635 (Q) |
804 (A) |
| 665 (R) |
808 (G) |
| 678 (I) |
804 (A) |
| 713 (K) |
803 (A) |
| 736 (K) |
813 (A) |
Interactions between protein chain D and nucleic acid chain
F
| Protein |
Nucleic acid |
| 534 (S) |
902 (G) |
| 534 (S) |
903 (C) |
| 535 (E) |
904 (C) |
| 536 (Y) |
902 (G) |
| 537 (R) |
906 (G) |
| 568 (K) |
904 (C) |
| 575 (D) |
909 (C) |
| 581 (R) |
906 (G) |
| 585 (K) |
902 (G) |
| 585 (K) |
903 (C) |
| 617 (D) |
913 (A) |
| 619 (S) |
915 (A) |
| 623 (Q) |
917 (A) |
| 625 (K) |
918 (G) |
| 641 (Q) |
915 (A) |
| 645 (K) |
913 (A) |
| 667 (R) |
914 (G) |
| 695 (K) |
915 (A) |
| 733 (N) |
916 (C) |
| 734 (D) |
915 (A) |
| 735 (S) |
916 (C) |
| 739 (K) |
917 (A) |
| 740 (T) |
917 (A) |
Interactions between protein chain G and nucleic acid chain
H
| Protein |
Nucleic acid |
| 1043 (K) |
1314 (A) |
| 1131 (K) |
1302 (C) |
| 1178 (I) |
1304 (A) |
Interactions between protein chain G and nucleic acid chain
I
| Protein |
Nucleic acid |
| 1034 (S) |
1402 (G) |
| 1034 (S) |
1403 (C) |
| 1068 (K) |
1404 (C) |
| 1145 (K) |
1413 (A) |
| 1234 (D) |
1415 (A) |
| 1239 (K) |
1417 (A) |
| 1240 (T) |
1417 (A) |
Interactions between protein chain J and nucleic acid chain
K
| Protein |
Nucleic acid |
| 1543 (K) |
1814 (A) |
| 1631 (K) |
1802 (C) |
| 1678 (I) |
1804 (A) |
Interactions between protein chain J and nucleic acid chain
L
| Protein |
Nucleic acid |
| 1534 (S) |
1902 (G) |
| 1534 (S) |
1903 (C) |
| 1568 (K) |
1904 (C) |
| 1645 (K) |
1913 (A) |
| 1734 (D) |
1915 (A) |