Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1ma7
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
C
| Protein |
Nucleic acid |
| 38 (S) |
22 (T) |
| 41 (T) |
22 (T) |
| 90 (Q) |
22 (T) |
| 106 (R) |
20 (G) |
| 173 (R) |
23 (A) |
| 201 (K) |
23 (A) |
| 244 (K) |
34 (T) |
| 283 (Y) |
26 (C) |
| 289 (H) |
25 (A) |
Interactions between protein chain A and nucleic acid chain
D
| Protein |
Nucleic acid |
| 47 (S) |
10 (T) |
| 50 (R) |
10 (T) |
| 81 (R) |
11 (A) |
| 84 (A) |
12 (T) |
| 86 (K) |
14 (G) |
| 87 (T) |
12 (T) |
| 91 (H) |
11 (A) |
| 132 (K) |
13 (A) |
| 159 (R) |
5 (C) |
| 202 (T) |
17 (T) |
| 242 (V) |
4 (A) |
| 242 (V) |
5 (C) |
| 244 (K) |
2 (T) |
| 257 (S) |
6 (T) |
| 315 (W) |
15 (C) |
| 324 (Y) |
14 (G) |
Interactions between protein chain B and nucleic acid chain
C
| Protein |
Nucleic acid |
| 47 (S) |
10 (T) |
| 50 (R) |
10 (T) |
| 81 (R) |
11 (A) |
| 84 (A) |
12 (T) |
| 86 (K) |
14 (A) |
| 87 (T) |
12 (T) |
| 122 (K) |
22 (T) |
| 132 (K) |
13 (A) |
| 156 (Q) |
4 (A) |
| 159 (R) |
5 (C) |
| 173 (R) |
15 (T) |
| 201 (K) |
14 (A) |
| 201 (K) |
15 (T) |
| 242 (V) |
5 (C) |
| 244 (K) |
2 (T) |
| 257 (S) |
6 (T) |
| 315 (W) |
15 (T) |
| 316 (T) |
16 (G) |
| 317 (N) |
16 (G) |
| 324 (Y) |
15 (T) |
Interactions between protein chain B and nucleic acid chain
D
| Protein |
Nucleic acid |
| 38 (S) |
22 (T) |
| 38 (S) |
23 (A) |
| 41 (T) |
22 (T) |
| 90 (Q) |
22 (T) |
| 100 (R) |
21 (T) |
| 101 (R) |
21 (T) |
| 106 (R) |
19 (C) |
| 106 (R) |
20 (A) |
| 121 (R) |
18 (A) |
| 175 (A) |
24 (T) |
| 243 (R) |
32 (T) |
| 283 (Y) |
26 (C) |
| 287 (S) |
25 (A) |
| 288 (G) |
25 (A) |
| 289 (H) |
25 (A) |