Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1kx4
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
I
| Protein |
Nucleic acid |
| 42 (R) |
-5 (A) |
| 42 (R) |
71 (G) |
| 45 (T) |
71 (G) |
| 72 (R) |
-23 (T) |
| 84 (F) |
-24 (C) |
| 84 (F) |
-23 (T) |
| 86 (S) |
-24 (C) |
| 117 (V) |
-3 (T) |
| 118 (T) |
-4 (C) |
| 118 (T) |
-3 (T) |
Interactions between protein chain A and nucleic acid chain
J
| Protein |
Nucleic acid |
| 41 (Y) |
-68 (C) |
| 41 (Y) |
10 (G) |
| 44 (G) |
8 (A) |
| 44 (G) |
9 (A) |
| 46 (V) |
9 (A) |
| 47 (A) |
9 (A) |
| 64 (K) |
18 (T) |
| 65 (L) |
18 (T) |
| 69 (R) |
17 (T) |
Interactions between protein chain B and nucleic acid chain
I
| Protein |
Nucleic acid |
| 36 (R) |
-13 (A) |
Interactions between protein chain B and nucleic acid chain
J
| Protein |
Nucleic acid |
| 35 (R) |
8 (A) |
| 46 (I) |
8 (A) |
| 79 (K) |
28 (A) |
| 80 (T) |
28 (A) |
Interactions between protein chain C and nucleic acid chain
I
| Protein |
Nucleic acid |
| 17 (R) |
-43 (A) |
| 32 (R) |
-44 (A) |
Interactions between protein chain C and nucleic acid chain
J
| Protein |
Nucleic acid |
| 29 (R) |
49 (G) |
| 43 (V) |
39 (C) |
| 45 (A) |
38 (A) |
| 77 (R) |
58 (G) |
Interactions between protein chain D and nucleic acid chain
I
| Protein |
Nucleic acid |
| 24 (K) |
-47 (T) |
| 27 (R) |
31 (T) |
| 29 (T) |
29 (A) |
| 29 (T) |
30 (G) |
| 51 (I) |
-53 (G) |
| 53 (S) |
-54 (C) |
| 84 (S) |
-34 (T) |
| 85 (T) |
-34 (T) |
Interactions between protein chain D and nucleic acid chain
J
| Protein |
Nucleic acid |
| 26 (R) |
-28 (G) |
| 31 (K) |
50 (A) |
| 37 (Y) |
48 (C) |
Interactions between protein chain E and nucleic acid chain
I
| Protein |
Nucleic acid |
| 41 (Y) |
10 (A) |
| 44 (G) |
8 (G) |
| 44 (G) |
9 (A) |
| 46 (V) |
9 (A) |
| 47 (A) |
9 (A) |
| 64 (K) |
18 (T) |
| 65 (L) |
18 (T) |
Interactions between protein chain E and nucleic acid chain
J
| Protein |
Nucleic acid |
| 42 (R) |
70 (G) |
| 45 (T) |
70 (G) |
| 63 (R) |
-13 (A) |
| 72 (R) |
-23 (A) |
| 84 (F) |
-23 (A) |
| 86 (S) |
-24 (T) |
| 117 (V) |
-3 (G) |
| 118 (T) |
-4 (T) |
| 118 (T) |
-3 (G) |
Interactions between protein chain F and nucleic acid chain
I
| Protein |
Nucleic acid |
| 46 (I) |
8 (G) |
| 47 (S) |
7 (T) |
| 79 (K) |
28 (C) |
| 80 (T) |
28 (C) |
Interactions between protein chain F and nucleic acid chain
J
| Protein |
Nucleic acid |
| 36 (R) |
-13 (A) |
Interactions between protein chain G and nucleic acid chain
I
| Protein |
Nucleic acid |
| 29 (R) |
49 (C) |
| 43 (V) |
39 (A) |
| 45 (A) |
38 (C) |
Interactions between protein chain G and nucleic acid chain
J
| Protein |
Nucleic acid |
| 17 (R) |
-43 (A) |
| 20 (R) |
-42 (A) |
| 32 (R) |
-44 (A) |
Interactions between protein chain H and nucleic acid chain
I
| Protein |
Nucleic acid |
| 31 (K) |
50 (G) |
| 37 (Y) |
48 (A) |
Interactions between protein chain H and nucleic acid chain
J
| Protein |
Nucleic acid |
| 29 (T) |
30 (T) |
| 51 (I) |
-54 (G) |
| 53 (S) |
-55 (C) |
| 84 (S) |
-34 (C) |