Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1kc6
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
E
| Protein |
Nucleic acid |
| 201 (N) |
5 (G) |
| 209 (Q) |
5 (G) |
| 248 (K) |
5 (G) |
Interactions between protein chain A and nucleic acid chain
F
| Protein |
Nucleic acid |
| 109 (Q) |
7 (C) |
| 110 (N) |
6 (T) |
| 130 (T) |
9 (A) |
| 132 (N) |
10 (C) |
| 139 (A) |
10 (C) |
| 141 (N) |
8 (G) |
| 141 (N) |
9 (A) |
| 144 (S) |
6 (T) |
| 144 (S) |
7 (C) |
| 147 (K) |
7 (C) |
| 207 (Q) |
7 (C) |
Interactions between protein chain B and nucleic acid chain
E
| Protein |
Nucleic acid |
| 109 (Q) |
7 (C) |
| 130 (T) |
9 (A) |
| 132 (N) |
10 (C) |
| 139 (A) |
10 (C) |
| 141 (N) |
8 (G) |
| 141 (N) |
9 (A) |
| 144 (S) |
6 (T) |
| 144 (S) |
7 (C) |
| 147 (K) |
7 (C) |
| 207 (Q) |
7 (C) |
Interactions between protein chain B and nucleic acid chain
F
| Protein |
Nucleic acid |
| 108 (K) |
11 (C) |
| 201 (N) |
5 (G) |
| 209 (Q) |
5 (G) |
| 241 (R) |
5 (G) |
| 248 (K) |
5 (G) |
Interactions between protein chain C and nucleic acid chain
G
| Protein |
Nucleic acid |
| 93 (K) |
13 (G) |
| 109 (Q) |
9 (A) |
| 201 (N) |
5 (G) |
| 209 (Q) |
5 (G) |
| 248 (K) |
4 (G) |
Interactions between protein chain C and nucleic acid chain
H
| Protein |
Nucleic acid |
| 129 (K) |
8 (G) |
| 130 (T) |
9 (A) |
| 132 (N) |
10 (C) |
| 135 (K) |
11 (C) |
| 139 (A) |
10 (C) |
| 141 (N) |
8 (G) |
| 141 (N) |
9 (A) |
| 144 (S) |
6 (T) |
| 147 (K) |
7 (C) |
| 207 (Q) |
7 (C) |
Interactions between protein chain D and nucleic acid chain
G
| Protein |
Nucleic acid |
| 110 (N) |
6 (T) |
| 129 (K) |
8 (G) |
| 130 (T) |
9 (A) |
| 135 (K) |
11 (C) |
| 139 (A) |
10 (C) |
| 141 (N) |
8 (G) |
| 141 (N) |
9 (A) |
| 144 (S) |
6 (T) |
| 147 (K) |
7 (C) |
| 207 (Q) |
7 (C) |
Interactions between protein chain D and nucleic acid chain
H
| Protein |
Nucleic acid |
| 93 (K) |
13 (G) |
| 201 (N) |
5 (G) |
| 209 (Q) |
5 (G) |
| 241 (R) |
5 (G) |