Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1k82
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
E
| Protein |
Nucleic acid |
| 88 (K) |
409 (C) |
| 89 (H) |
409 (C) |
| 108 (R) |
407 (C) |
| 109 (R) |
408 (T) |
| 149 (K) |
401 (G) |
| 257 (Q) |
404 (T) |
Interactions between protein chain A and nucleic acid chain
I
| Protein |
Nucleic acid |
| 33 (R) |
429 (A) |
| 56 (K) |
428 (G) |
| 56 (K) |
429 (A) |
| 70 (H) |
429 (A) |
| 160 (N) |
429 (A) |
| 168 (N) |
428 (G) |
| 258 (R) |
428 (G) |
Interactions between protein chain A and nucleic acid chain
J
| Protein |
Nucleic acid |
| 148 (K) |
432 (C) |
| 149 (K) |
433 (C) |
| 150 (K) |
433 (C) |
| 151 (T) |
433 (C) |
Interactions between protein chain B and nucleic acid chain
F
| Protein |
Nucleic acid |
| 89 (H) |
409 (C) |
| 108 (R) |
407 (C) |
| 109 (R) |
407 (C) |
| 109 (R) |
408 (T) |
| 149 (K) |
401 (G) |
| 257 (Q) |
404 (T) |
Interactions between protein chain B and nucleic acid chain
I
| Protein |
Nucleic acid |
| 149 (K) |
433 (C) |
| 150 (K) |
433 (C) |
| 151 (T) |
433 (C) |
Interactions between protein chain B and nucleic acid chain
J
| Protein |
Nucleic acid |
| 33 (R) |
429 (A) |
| 56 (K) |
428 (G) |
| 56 (K) |
429 (A) |
| 70 (H) |
428 (G) |
| 70 (H) |
429 (A) |
| 160 (N) |
429 (A) |
| 168 (N) |
428 (G) |
| 258 (R) |
428 (G) |
Interactions between protein chain C and nucleic acid chain
G
| Protein |
Nucleic acid |
| 31 (R) |
407 (C) |
| 88 (K) |
409 (C) |
| 89 (H) |
409 (C) |
| 108 (R) |
407 (C) |
| 149 (K) |
401 (G) |
| 257 (Q) |
404 (T) |
Interactions between protein chain C and nucleic acid chain
K
| Protein |
Nucleic acid |
| 33 (R) |
429 (A) |
| 33 (R) |
430 (A) |
| 56 (K) |
428 (G) |
| 56 (K) |
429 (A) |
| 70 (H) |
429 (A) |
| 160 (N) |
429 (A) |
| 168 (N) |
428 (G) |
| 236 (Y) |
426 (A) |
| 258 (R) |
428 (G) |
Interactions between protein chain C and nucleic acid chain
L
| Protein |
Nucleic acid |
| 149 (K) |
433 (C) |
| 150 (K) |
433 (C) |
| 151 (T) |
433 (C) |
Interactions between protein chain D and nucleic acid chain
H
| Protein |
Nucleic acid |
| 88 (K) |
409 (C) |
| 89 (H) |
409 (C) |
| 108 (R) |
407 (C) |
| 149 (K) |
401 (G) |
| 257 (Q) |
404 (T) |
Interactions between protein chain D and nucleic acid chain
K
| Protein |
Nucleic acid |
| 149 (K) |
433 (C) |
| 150 (K) |
433 (C) |
| 151 (T) |
433 (C) |
Interactions between protein chain D and nucleic acid chain
L
| Protein |
Nucleic acid |
| 33 (R) |
429 (A) |
| 56 (K) |
428 (G) |
| 56 (K) |
429 (A) |
| 70 (H) |
429 (A) |
| 160 (N) |
429 (A) |
| 168 (N) |
428 (G) |
| 236 (Y) |
426 (A) |
| 258 (R) |
428 (G) |