Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1j2b
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
C
| Protein |
Nucleic acid |
| 418 (A) |
909 (G) |
| 419 (Q) |
909 (G) |
| 421 (E) |
911 (U) |
| 425 (D) |
938 (G) |
| 430 (K) |
926 (C) |
| 466 (T) |
909 (G) |
| 466 (T) |
926 (C) |
| 470 (R) |
909 (G) |
| 473 (K) |
967 (C) |
| 478 (R) |
968 (G) |
| 478 (R) |
969 (G) |
| 481 (T) |
968 (G) |
| 485 (D) |
909 (G) |
| 490 (T) |
969 (G) |
| 515 (E) |
977 (A) |
| 525 (D) |
975 (C) |
| 525 (D) |
977 (A) |
| 529 (K) |
976 (C) |
| 529 (K) |
977 (A) |
| 578 (R) |
970 (G) |
Interactions between protein chain A and nucleic acid chain
D
| Protein |
Nucleic acid |
| 43 (K) |
917 (U) |
| 100 (Q) |
916 (U) |
| 100 (Q) |
917 (U) |
| 104 (Y) |
917 (U) |
| 130 (D) |
915 (G) |
| 136 (D) |
933 (C) |
| 136 (D) |
940 (G) |
| 202 (E) |
912 (C) |
| 208 (D) |
938 (G) |
| 249 (D) |
915 (G) |
| 251 (A) |
915 (G) |
| 252 (S) |
914 (A) |
| 256 (Y) |
913 (U) |
| 261 (R) |
913 (U) |
| 268 (T) |
913 (U) |
Interactions between protein chain B and nucleic acid chain
C
| Protein |
Nucleic acid |
| 95 (D) |
915 (G) |
| 100 (Q) |
916 (U) |
| 130 (D) |
915 (G) |
| 136 (D) |
933 (C) |
| 169 (Q) |
915 (G) |
| 196 (G) |
915 (G) |
| 202 (E) |
912 (C) |
| 204 (Y) |
912 (C) |
| 204 (Y) |
913 (U) |
| 205 (R) |
940 (G) |
| 249 (D) |
915 (G) |
| 250 (S) |
914 (A) |
| 256 (Y) |
913 (U) |
| 261 (R) |
913 (U) |
| 268 (T) |
913 (U) |
| 339 (H) |
911 (U) |
Interactions between protein chain B and nucleic acid chain
D
| Protein |
Nucleic acid |
| 367 (A) |
911 (U) |
| 418 (A) |
909 (G) |
| 425 (D) |
938 (G) |
| 464 (S) |
908 (U) |
| 465 (K) |
949 (C) |
| 466 (T) |
909 (G) |
| 466 (T) |
926 (C) |
| 478 (R) |
967 (C) |
| 481 (T) |
968 (G) |
| 525 (D) |
977 (A) |
| 579 (K) |
968 (G) |