Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1ign
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
C
| Protein |
Nucleic acid |
| 360 (K) |
5 (A) |
| 361 (A) |
5 (A) |
| 363 (F) |
5 (A) |
| 398 (H) |
6 (C) |
| 399 (T) |
7 (A) |
| 401 (N) |
7 (A) |
| 401 (N) |
8 (C) |
| 402 (S) |
6 (C) |
| 406 (R) |
5 (A) |
| 410 (Y) |
4 (C) |
| 446 (K) |
13 (A) |
| 447 (R) |
13 (A) |
| 447 (R) |
14 (C) |
| 536 (H) |
14 (C) |
| 537 (T) |
15 (A) |
| 543 (D) |
14 (C) |
| 544 (R) |
13 (A) |
| 575 (K) |
12 (C) |
| 576 (N) |
12 (C) |
| 578 (T) |
12 (C) |
| 588 (T) |
9 (C) |
| 589 (P) |
10 (C) |
| 590 (G) |
9 (C) |
| 591 (N) |
8 (C) |
| 593 (N) |
8 (C) |
| 594 (S) |
7 (A) |
Interactions between protein chain A and nucleic acid chain
D
| Protein |
Nucleic acid |
| 383 (T) |
30 (G) |
| 385 (H) |
29 (T) |
| 385 (H) |
31 (G) |
| 386 (T) |
29 (T) |
| 404 (R) |
31 (G) |
| 404 (R) |
32 (G) |
| 444 (S) |
30 (G) |
| 445 (I) |
30 (G) |
| 446 (K) |
30 (G) |
| 521 (I) |
22 (T) |
| 524 (E) |
21 (C) |
| 542 (R) |
23 (G) |
| 546 (R) |
24 (G) |
| 547 (K) |
25 (T) |
Interactions between protein chain B and nucleic acid chain
E
| Protein |
Nucleic acid |
| 360 (K) |
5 (A) |
| 360 (K) |
6 (C) |
| 361 (A) |
5 (A) |
| 361 (A) |
6 (C) |
| 363 (F) |
5 (A) |
| 398 (H) |
6 (C) |
| 399 (T) |
7 (A) |
| 401 (N) |
7 (A) |
| 401 (N) |
8 (C) |
| 402 (S) |
6 (C) |
| 406 (R) |
5 (A) |
| 410 (Y) |
4 (C) |
| 446 (K) |
13 (A) |
| 447 (R) |
13 (A) |
| 447 (R) |
14 (C) |
| 536 (H) |
14 (C) |
| 537 (T) |
15 (A) |
| 543 (D) |
14 (C) |
| 544 (R) |
13 (A) |
| 575 (K) |
12 (C) |
| 576 (N) |
12 (C) |
| 577 (L) |
12 (C) |
| 578 (T) |
12 (C) |
| 588 (T) |
9 (C) |
| 589 (P) |
10 (C) |
| 590 (G) |
9 (C) |
| 591 (N) |
8 (C) |
| 593 (N) |
8 (C) |
| 594 (S) |
7 (A) |
Interactions between protein chain B and nucleic acid chain
F
| Protein |
Nucleic acid |
| 383 (T) |
30 (G) |
| 385 (H) |
29 (T) |
| 385 (H) |
30 (G) |
| 385 (H) |
31 (G) |
| 386 (T) |
29 (T) |
| 404 (R) |
31 (G) |
| 404 (R) |
32 (G) |
| 444 (S) |
30 (G) |
| 445 (I) |
30 (G) |
| 446 (K) |
30 (G) |
| 518 (R) |
23 (G) |
| 521 (I) |
22 (T) |
| 524 (E) |
21 (C) |
| 542 (R) |
23 (G) |
| 546 (R) |
24 (G) |
| 547 (K) |
25 (T) |