Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1i94
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain B and nucleic acid chain
A
| Protein |
Nucleic acid |
| 99 (G) |
1084 (A) |
| 103 (T) |
1056 (G) |
Interactions between protein chain C and nucleic acid chain
A
| Protein |
Nucleic acid |
| 5 (I) |
1171 (G) |
| 161 (E) |
1037 (A) |
| 163 (A) |
1038 (U) |
| 173 (V) |
1089 (C) |
| 178 (L) |
1094 (C) |
| 192 (T) |
1187 (G) |
| 195 (V) |
1038 (U) |
Interactions between protein chain D and nucleic acid chain
A
| Protein |
Nucleic acid |
| 2 (G) |
530 (A) |
| 8 (V) |
425 (A) |
| 22 (K) |
403 (A) |
| 41 (G) |
421 (G) |
| 41 (G) |
422 (U) |
| 42 (Q) |
524 (G) |
| 72 (E) |
529 (G) |
| 134 (D) |
602 (U) |
| 205 (E) |
8 (A) |
Interactions between protein chain E and nucleic acid chain
A
| Protein |
Nucleic acid |
| 16 (T) |
16 (A) |
| 19 (M) |
898 (U) |
| 20 (Q) |
1380 (A) |
| 95 (A) |
6 (G) |
| 120 (T) |
7 (G) |
Interactions between protein chain F and nucleic acid chain
A
| Protein |
Nucleic acid |
| 90 (V) |
719 (C) |
| 92 (K) |
720 (A) |
Interactions between protein chain G and nucleic acid chain
A
| Protein |
Nucleic acid |
| 2 (A) |
1361 (G) |
| 30 (I) |
1221 (U) |
| 34 (G) |
1354 (U) |
Interactions between protein chain H and nucleic acid chain
A
| Protein |
Nucleic acid |
| 30 (R) |
573 (C) |
| 97 (V) |
583 (C) |
| 115 (P) |
623 (A) |
| 130 (G) |
582 (C) |
Interactions between protein chain I and nucleic acid chain
A
| Protein |
Nucleic acid |
| 68 (G) |
1353 (G) |
| 72 (G) |
1354 (U) |
| 110 (E) |
1329 (U) |
| 112 (K) |
1351 (C) |
| 115 (G) |
1349 (C) |
| 120 (R) |
1330 (A) |
| 121 (R) |
1330 (A) |
Interactions between protein chain J and nucleic acid chain
A
| Protein |
Nucleic acid |
| 35 (S) |
1105 (A) |
| 40 (L) |
1132 (U) |
| 42 (T) |
1133 (A) |
| 55 (K) |
950 (G) |
Interactions between protein chain K and nucleic acid chain
A
| Protein |
Nucleic acid |
| 37 (G) |
690 (C) |
| 39 (P) |
667 (A) |
| 46 (G) |
672 (C) |
| 116 (H) |
658 (A) |
| 116 (H) |
700 (C) |
| 117 (N) |
699 (A) |
| 120 (R) |
761 (G) |
| 123 (K) |
763 (A) |
| 129 (S) |
1512 (C) |
Interactions between protein chain L and nucleic acid chain
A
| Protein |
Nucleic acid |
| 31 (P) |
535 (U) |
| 50 (S) |
512 (G) |
| 72 (G) |
505 (C) |
| 87 (G) |
535 (U) |
| 114 (K) |
521 (G) |
| 118 (S) |
35 (G) |
| 118 (S) |
485 (G) |
Interactions between protein chain M and nucleic acid chain
A
| Protein |
Nucleic acid |
| 24 (G) |
1311 (U) |
| 26 (G) |
1310 (A) |
| 29 (R) |
1310 (A) |
Interactions between protein chain N and nucleic acid chain
A
| Protein |
Nucleic acid |
| 4 (K) |
1030 (G) |
| 18 (V) |
956 (C) |
| 19 (R) |
957 (C) |
| 35 (R) |
1339 (U) |
| 60 (S) |
1096 (C) |
Interactions between protein chain O and nucleic acid chain
A
| Protein |
Nucleic acid |
| 22 (T) |
733 (G) |
| 23 (G) |
733 (G) |
Interactions between protein chain P and nucleic acid chain
A
| Protein |
Nucleic acid |
| 6 (L) |
371 (G) |
| 9 (F) |
607 (C) |
| 25 (R) |
103 (C) |
| 31 (K) |
305 (G) |
| 42 (R) |
443 (C) |
| 61 (S) |
131 (C) |
| 62 (V) |
222 (G) |
| 63 (G) |
130 (C) |
| 80 (F) |
457 (A) |
Interactions between protein chain Q and nucleic acid chain
A
| Protein |
Nucleic acid |
| 2 (P) |
120 (G) |
| 16 (Q) |
249 (G) |
| 39 (S) |
275 (C) |
| 64 (P) |
259 (U) |
| 67 (K) |
248 (U) |
| 104 (K) |
874 (C) |
Interactions between protein chain R and nucleic acid chain
A
| Protein |
Nucleic acid |
| 50 (I) |
702 (C) |
| 61 (K) |
818 (U) |
| 81 (F) |
701 (G) |
Interactions between protein chain S and nucleic acid chain
A
| Protein |
Nucleic acid |
| 53 (N) |
935 (A) |
| 54 (G) |
1201 (G) |
| 55 (K) |
963 (A) |
| 77 (T) |
936 (A) |
Interactions between protein chain T and nucleic acid chain
A
| Protein |
Nucleic acid |
| 101 (G) |
197 (G) |
| 102 (G) |
197 (G) |
| 105 (S) |
181 (C) |
Interactions between protein chain U and nucleic acid chain
A
| Protein |
Nucleic acid |
| 20 (K) |
1308 (C) |