Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1hcq
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
C
| Protein |
Nucleic acid |
| 17 (Y) |
2 (C) |
| 18 (H) |
3 (A) |
| 19 (Y) |
3 (A) |
| 19 (Y) |
4 (G) |
| 28 (K) |
4 (G) |
| 32 (K) |
5 (G) |
| 32 (K) |
6 (T) |
Interactions between protein chain A and nucleic acid chain
D
| Protein |
Nucleic acid |
| 25 (E) |
33 (C) |
| 33 (R) |
30 (T) |
| 33 (R) |
31 (G) |
| 56 (R) |
31 (G) |
| 57 (K) |
31 (G) |
| 60 (Q) |
30 (T) |
| 63 (R) |
31 (G) |
Interactions between protein chain B and nucleic acid chain
C
| Protein |
Nucleic acid |
| 25 (E) |
15 (C) |
| 33 (R) |
12 (T) |
| 33 (R) |
13 (G) |
| 56 (R) |
13 (G) |
| 57 (K) |
13 (G) |
| 60 (Q) |
12 (T) |
| 63 (R) |
13 (G) |
Interactions between protein chain B and nucleic acid chain
D
| Protein |
Nucleic acid |
| 17 (Y) |
20 (C) |
| 18 (H) |
21 (A) |
| 19 (Y) |
21 (A) |
| 19 (Y) |
22 (G) |
| 28 (K) |
22 (G) |
| 32 (K) |
23 (G) |
Interactions between protein chain E and nucleic acid chain
G
| Protein |
Nucleic acid |
| 17 (Y) |
2 (C) |
| 18 (H) |
3 (A) |
| 19 (Y) |
3 (A) |
| 19 (Y) |
4 (G) |
| 28 (K) |
4 (G) |
| 32 (K) |
5 (G) |
Interactions between protein chain E and nucleic acid chain
H
| Protein |
Nucleic acid |
| 25 (E) |
33 (C) |
| 33 (R) |
30 (T) |
| 33 (R) |
31 (G) |
| 53 (K) |
31 (G) |
| 60 (Q) |
30 (T) |
| 63 (R) |
31 (G) |
Interactions between protein chain F and nucleic acid chain
G
| Protein |
Nucleic acid |
| 25 (E) |
15 (C) |
| 33 (R) |
12 (T) |
| 33 (R) |
13 (G) |
| 60 (Q) |
12 (T) |
| 63 (R) |
13 (G) |
Interactions between protein chain F and nucleic acid chain
H
| Protein |
Nucleic acid |
| 17 (Y) |
20 (C) |
| 18 (H) |
21 (A) |
| 19 (Y) |
21 (A) |
| 19 (Y) |
22 (G) |
| 28 (K) |
22 (G) |
| 32 (K) |
23 (G) |