Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1h88
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
D
| Protein |
Nucleic acid |
| 274 (Y) |
11 (A) |
| 278 (R) |
10 (C) |
| 278 (R) |
11 (A) |
| 281 (N) |
11 (A) |
| 282 (N) |
10 (C) |
| 286 (R) |
9 (G) |
| 289 (R) |
9 (G) |
Interactions between protein chain A and nucleic acid chain
E
| Protein |
Nucleic acid |
| 281 (N) |
16 (T) |
| 287 (K) |
15 (A) |
| 288 (S) |
16 (T) |
Interactions between protein chain B and nucleic acid chain
D
| Protein |
Nucleic acid |
| 281 (N) |
5 (T) |
| 287 (K) |
4 (G) |
| 288 (S) |
5 (T) |
| 289 (R) |
7 (G) |
| 291 (K) |
5 (T) |
Interactions between protein chain B and nucleic acid chain
E
| Protein |
Nucleic acid |
| 274 (Y) |
22 (C) |
| 278 (R) |
21 (C) |
| 281 (N) |
22 (C) |
| 282 (N) |
21 (C) |
| 289 (R) |
20 (G) |
Interactions between protein chain C and nucleic acid chain
D
| Protein |
Nucleic acid |
| 92 (K) |
21 (G) |
| 128 (K) |
22 (G) |
| 132 (E) |
20 (C) |
| 133 (R) |
19 (A) |
| 179 (N) |
19 (A) |
| 183 (N) |
18 (A) |
Interactions between protein chain C and nucleic acid chain
E
| Protein |
Nucleic acid |
| 114 (R) |
4 (G) |
| 115 (W) |
4 (G) |
| 116 (S) |
3 (A) |
| 131 (R) |
5 (T) |
| 164 (N) |
8 (G) |
| 166 (W) |
8 (G) |
| 167 (A) |
7 (C) |
| 182 (K) |
8 (G) |
| 182 (K) |
9 (T) |