Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1gtn
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain L and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
103 (G) |
| 35 (S) |
104 (C) |
| 36 (E) |
108 (G) |
| 37 (K) |
104 (C) |
| 37 (K) |
107 (A) |
| 39 (D) |
106 (G) |
| 56 (K) |
103 (G) |
Interactions between protein chain M and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
108 (G) |
| 32 (F) |
108 (G) |
| 36 (E) |
113 (G) |
| 37 (K) |
109 (C) |
| 37 (K) |
112 (A) |
| 39 (D) |
111 (G) |
Interactions between protein chain N and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
113 (G) |
| 36 (E) |
118 (G) |
| 37 (K) |
114 (C) |
| 37 (K) |
117 (A) |
| 39 (D) |
116 (G) |
Interactions between protein chain O and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
118 (G) |
| 36 (E) |
123 (G) |
| 37 (K) |
119 (C) |
| 37 (K) |
122 (A) |
| 39 (D) |
121 (G) |
Interactions between protein chain P and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
123 (G) |
| 32 (F) |
123 (G) |
| 36 (E) |
128 (G) |
| 37 (K) |
124 (C) |
| 37 (K) |
127 (A) |
| 39 (D) |
126 (G) |
Interactions between protein chain Q and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
128 (G) |
| 32 (F) |
128 (G) |
| 36 (E) |
133 (G) |
| 37 (K) |
129 (C) |
| 37 (K) |
132 (A) |
| 39 (D) |
131 (G) |
| 56 (K) |
128 (G) |
Interactions between protein chain R and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
133 (G) |
| 32 (F) |
133 (G) |
| 36 (E) |
138 (G) |
| 37 (K) |
134 (C) |
| 37 (K) |
137 (A) |
| 39 (D) |
136 (G) |
| 56 (K) |
133 (G) |
Interactions between protein chain S and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
138 (G) |
| 32 (F) |
138 (G) |
| 36 (E) |
143 (G) |
| 37 (K) |
139 (C) |
| 37 (K) |
142 (A) |
| 39 (D) |
141 (G) |
Interactions between protein chain T and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
143 (G) |
| 36 (E) |
148 (G) |
| 37 (K) |
144 (C) |
| 37 (K) |
147 (A) |
| 39 (D) |
146 (G) |
Interactions between protein chain U and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
148 (G) |
| 32 (F) |
148 (G) |
| 36 (E) |
153 (G) |
| 37 (K) |
149 (C) |
| 37 (K) |
152 (A) |
| 39 (D) |
151 (G) |
Interactions between protein chain V and nucleic acid chain
W
| Protein |
Nucleic acid |
| 30 (T) |
153 (G) |
| 32 (F) |
153 (G) |
| 36 (E) |
103 (G) |
| 37 (K) |
102 (A) |
| 37 (K) |
154 (C) |
| 39 (D) |
101 (G) |