Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1gt0
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain C and nucleic acid chain
A
| Protein |
Nucleic acid |
| 20 (R) |
12 (G) |
| 27 (Q) |
12 (G) |
| 27 (Q) |
13 (A) |
| 44 (Q) |
13 (A) |
| 45 (T) |
14 (T) |
| 48 (S) |
13 (A) |
| 49 (R) |
15 (G) |
| 103 (K) |
19 (A) |
| 103 (K) |
20 (T) |
| 105 (R) |
17 (T) |
| 106 (T) |
18 (A) |
| 106 (T) |
19 (A) |
| 113 (R) |
18 (A) |
| 151 (N) |
19 (A) |
| 155 (K) |
17 (T) |
Interactions between protein chain C and nucleic acid chain
B
| Protein |
Nucleic acid |
| 43 (S) |
34 (G) |
| 45 (T) |
35 (C) |
| 46 (T) |
34 (G) |
| 56 (S) |
32 (T) |
| 59 (N) |
33 (A) |
| 102 (R) |
34 (G) |
| 104 (K) |
35 (C) |
| 107 (S) |
35 (C) |
| 107 (S) |
36 (A) |
Interactions between protein chain D and nucleic acid chain
A
| Protein |
Nucleic acid |
| 5 (R) |
8 (T) |
| 5 (R) |
9 (T) |
| 8 (N) |
6 (T) |
| 31 (S) |
3 (C) |
| 34 (S) |
4 (T) |
| 41 (W) |
7 (G) |
| 75 (R) |
11 (G) |
Interactions between protein chain D and nucleic acid chain
B
| Protein |
Nucleic acid |
| 5 (R) |
43 (C) |
| 5 (R) |
44 (A) |
| 15 (R) |
45 (A) |
| 15 (R) |
46 (A) |
| 30 (N) |
47 (G) |
| 72 (Y) |
42 (A) |
| 77 (K) |
42 (A) |