Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1flo
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
E
| Protein |
Nucleic acid |
| 3 (Q) |
-10 (C) |
| 62 (T) |
-9 (T) |
| 66 (N) |
-8 (A) |
| 170 (R) |
-16 (A) |
| 170 (R) |
-14 (G) |
| 174 (T) |
-14 (G) |
| 178 (Y) |
-14 (G) |
| 223 (K) |
-5 (C) |
| 278 (N) |
-12 (T) |
| 282 (S) |
-13 (T) |
| 285 (K) |
-13 (T) |
Interactions between protein chain A and nucleic acid chain
F
| Protein |
Nucleic acid |
| 47 (H) |
5 (G) |
| 53 (K) |
6 (A) |
| 56 (T) |
6 (A) |
| 60 (Y) |
5 (G) |
| 82 (K) |
5 (G) |
| 84 (Q) |
4 (A) |
| 193 (S) |
7 (A) |
| 193 (S) |
8 (T) |
| 281 (R) |
11 (G) |
| 284 (N) |
9 (A) |
| 300 (N) |
10 (G) |
| 303 (K) |
9 (A) |
| 304 (S) |
9 (A) |
| 305 (H) |
9 (A) |
Interactions between protein chain A and nucleic acid chain
J
| Protein |
Nucleic acid |
| 331 (S) |
-2 (T) |
Interactions between protein chain B and nucleic acid chain
G
| Protein |
Nucleic acid |
| 3 (Q) |
-10 (C) |
| 62 (T) |
-9 (T) |
| 66 (N) |
-8 (A) |
| 170 (R) |
-16 (A) |
| 170 (R) |
-14 (G) |
| 174 (T) |
-14 (G) |
| 178 (Y) |
-14 (G) |
| 223 (K) |
-5 (C) |
| 278 (N) |
-12 (T) |
| 282 (S) |
-13 (T) |
| 285 (K) |
-13 (T) |
Interactions between protein chain B and nucleic acid chain
H
| Protein |
Nucleic acid |
| 47 (H) |
5 (G) |
| 53 (K) |
6 (A) |
| 56 (T) |
6 (A) |
| 60 (Y) |
5 (G) |
| 82 (K) |
5 (G) |
| 84 (Q) |
4 (A) |
| 193 (S) |
7 (A) |
| 193 (S) |
8 (T) |
| 281 (R) |
11 (G) |
| 284 (N) |
9 (A) |
| 299 (K) |
11 (G) |
| 300 (N) |
10 (G) |
| 303 (K) |
9 (A) |
| 304 (S) |
9 (A) |
| 305 (H) |
9 (A) |
Interactions between protein chain B and nucleic acid chain
L
| Protein |
Nucleic acid |
| 331 (S) |
-2 (T) |
Interactions between protein chain C and nucleic acid chain
G
| Protein |
Nucleic acid |
| 343 (Y) |
-5 (C) |
Interactions between protein chain C and nucleic acid chain
H
| Protein |
Nucleic acid |
| 331 (S) |
-2 (T) |
| 333 (K) |
-2 (T) |
Interactions between protein chain C and nucleic acid chain
I
| Protein |
Nucleic acid |
| 62 (T) |
-9 (T) |
| 170 (R) |
-16 (A) |
| 170 (R) |
-14 (G) |
| 174 (T) |
-14 (G) |
| 223 (K) |
-5 (C) |
| 278 (N) |
-12 (T) |
| 285 (K) |
-14 (G) |
| 289 (K) |
-15 (A) |
Interactions between protein chain C and nucleic acid chain
J
| Protein |
Nucleic acid |
| 47 (H) |
5 (G) |
| 56 (T) |
6 (A) |
| 60 (Y) |
5 (G) |
| 82 (K) |
5 (G) |
| 84 (Q) |
3 (A) |
| 84 (Q) |
4 (A) |
| 192 (F) |
8 (T) |
| 193 (S) |
7 (A) |
| 193 (S) |
8 (T) |
| 281 (R) |
11 (G) |
| 300 (N) |
10 (G) |
| 303 (K) |
9 (A) |
| 304 (S) |
9 (A) |
| 305 (H) |
9 (A) |
Interactions between protein chain D and nucleic acid chain
F
| Protein |
Nucleic acid |
| 223 (K) |
-3 (T) |
| 331 (S) |
-2 (T) |
Interactions between protein chain D and nucleic acid chain
K
| Protein |
Nucleic acid |
| 62 (T) |
-9 (T) |
| 170 (R) |
-16 (A) |
| 170 (R) |
-15 (A) |
| 170 (R) |
-14 (G) |
| 174 (T) |
-14 (G) |
| 223 (K) |
-5 (C) |
| 278 (N) |
-12 (T) |
| 285 (K) |
-14 (G) |
| 289 (K) |
-15 (A) |
Interactions between protein chain D and nucleic acid chain
L
| Protein |
Nucleic acid |
| 47 (H) |
5 (G) |
| 56 (T) |
6 (A) |
| 60 (Y) |
5 (G) |
| 82 (K) |
5 (G) |
| 84 (Q) |
3 (A) |
| 84 (Q) |
4 (A) |
| 192 (F) |
8 (T) |
| 193 (S) |
8 (T) |
| 281 (R) |
11 (G) |
| 300 (N) |
10 (G) |
| 303 (K) |
9 (A) |
| 303 (K) |
10 (G) |
| 304 (S) |
9 (A) |
| 305 (H) |
9 (A) |