Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1f66
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
I
| Protein |
Nucleic acid |
| 442 (R) |
144 (G) |
| 442 (R) |
145 (A) |
| 445 (T) |
144 (G) |
| 472 (R) |
51 (A) |
| 484 (F) |
51 (A) |
| 486 (S) |
50 (C) |
| 517 (V) |
70 (G) |
| 518 (T) |
69 (C) |
| 518 (T) |
70 (G) |
Interactions between protein chain A and nucleic acid chain
J
| Protein |
Nucleic acid |
| 440 (R) |
229 (A) |
| 441 (Y) |
230 (C) |
| 444 (G) |
228 (A) |
| 444 (G) |
229 (A) |
| 446 (V) |
229 (A) |
| 447 (A) |
229 (A) |
| 464 (K) |
238 (T) |
| 465 (L) |
238 (T) |
| 469 (R) |
237 (T) |
Interactions between protein chain B and nucleic acid chain
I
| Protein |
Nucleic acid |
| 23 (R) |
61 (A) |
| 36 (R) |
60 (C) |
Interactions between protein chain B and nucleic acid chain
J
| Protein |
Nucleic acid |
| 35 (R) |
228 (A) |
| 46 (I) |
228 (A) |
| 48 (G) |
227 (G) |
| 79 (K) |
247 (C) |
| 80 (T) |
246 (G) |
| 80 (T) |
247 (C) |
Interactions between protein chain C and nucleic acid chain
I
| Protein |
Nucleic acid |
| 819 (R) |
31 (G) |
| 834 (R) |
30 (A) |
Interactions between protein chain C and nucleic acid chain
J
| Protein |
Nucleic acid |
| 831 (R) |
268 (G) |
| 837 (K) |
258 (T) |
| 846 (V) |
258 (T) |
| 848 (A) |
257 (A) |
| 879 (K) |
277 (G) |
| 879 (K) |
278 (C) |
| 880 (R) |
278 (C) |
Interactions between protein chain D and nucleic acid chain
I
| Protein |
Nucleic acid |
| 1253 (S) |
19 (A) |
| 1284 (S) |
39 (G) |
| 1284 (S) |
40 (G) |
| 1285 (T) |
40 (G) |
Interactions between protein chain D and nucleic acid chain
J
| Protein |
Nucleic acid |
| 1231 (K) |
269 (T) |
| 1233 (S) |
268 (G) |
Interactions between protein chain E and nucleic acid chain
I
| Protein |
Nucleic acid |
| 640 (R) |
82 (A) |
| 641 (Y) |
83 (A) |
| 644 (G) |
81 (G) |
| 644 (G) |
82 (A) |
| 646 (V) |
82 (A) |
| 647 (A) |
82 (A) |
| 663 (R) |
91 (T) |
| 664 (K) |
91 (T) |
| 665 (L) |
91 (T) |
Interactions between protein chain E and nucleic acid chain
J
| Protein |
Nucleic acid |
| 636 (K) |
291 (A) |
| 642 (R) |
215 (C) |
| 642 (R) |
290 (G) |
| 645 (T) |
290 (G) |
| 663 (R) |
207 (A) |
| 672 (R) |
197 (A) |
| 684 (F) |
197 (A) |
| 686 (S) |
196 (C) |
| 717 (V) |
217 (G) |
| 718 (T) |
217 (G) |
Interactions between protein chain F and nucleic acid chain
I
| Protein |
Nucleic acid |
| 235 (R) |
81 (G) |
| 246 (I) |
81 (G) |
| 248 (G) |
80 (T) |
| 279 (K) |
101 (C) |
| 280 (T) |
101 (C) |
Interactions between protein chain F and nucleic acid chain
J
| Protein |
Nucleic acid |
| 218 (H) |
199 (C) |
| 236 (R) |
207 (A) |
Interactions between protein chain G and nucleic acid chain
I
| Protein |
Nucleic acid |
| 1031 (R) |
121 (G) |
| 1031 (R) |
122 (G) |
| 1037 (K) |
112 (T) |
| 1045 (R) |
111 (A) |
| 1046 (V) |
112 (T) |
| 1048 (A) |
111 (A) |
| 1080 (R) |
132 (C) |
Interactions between protein chain G and nucleic acid chain
J
| Protein |
Nucleic acid |
| 1019 (R) |
177 (G) |
Interactions between protein chain H and nucleic acid chain
I
| Protein |
Nucleic acid |
| 1428 (K) |
123 (T) |
| 1430 (R) |
122 (G) |
| 1431 (K) |
123 (T) |
| 1433 (S) |
122 (G) |
Interactions between protein chain H and nucleic acid chain
J
| Protein |
Nucleic acid |
| 1429 (T) |
249 (G) |
| 1453 (S) |
165 (A) |
| 1483 (R) |
187 (A) |
| 1484 (S) |
185 (G) |
| 1485 (T) |
185 (G) |
| 1485 (T) |
186 (G) |