Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1ddn
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
E
| Protein |
Nucleic acid |
| 27 (R) |
311 (G) |
| 27 (R) |
312 (A) |
| 28 (A) |
311 (G) |
| 29 (R) |
310 (G) |
| 42 (S) |
312 (A) |
Interactions between protein chain A and nucleic acid chain
F
| Protein |
Nucleic acid |
| 7 (T) |
419 (G) |
| 37 (S) |
420 (C) |
| 40 (T) |
420 (C) |
| 43 (Q) |
419 (G) |
| 43 (Q) |
420 (C) |
| 50 (R) |
417 (A) |
Interactions between protein chain B and nucleic acid chain
E
| Protein |
Nucleic acid |
| 7 (T) |
321 (C) |
| 37 (S) |
322 (C) |
| 40 (T) |
322 (C) |
| 43 (Q) |
321 (C) |
| 47 (R) |
320 (A) |
| 50 (R) |
319 (T) |
Interactions between protein chain B and nucleic acid chain
F
| Protein |
Nucleic acid |
| 27 (R) |
410 (T) |
| 29 (R) |
408 (A) |
| 42 (S) |
410 (T) |
Interactions between protein chain C and nucleic acid chain
E
| Protein |
Nucleic acid |
| 7 (T) |
316 (C) |
| 36 (Q) |
316 (C) |
| 37 (S) |
317 (T) |
| 40 (T) |
317 (T) |
| 43 (Q) |
317 (T) |
| 50 (R) |
314 (A) |
Interactions between protein chain C and nucleic acid chain
F
| Protein |
Nucleic acid |
| 27 (R) |
414 (G) |
| 28 (A) |
414 (G) |
| 29 (R) |
413 (G) |
| 42 (S) |
415 (T) |
Interactions between protein chain D and nucleic acid chain
E
| Protein |
Nucleic acid |
| 28 (A) |
306 (A) |
| 42 (S) |
307 (T) |
Interactions between protein chain D and nucleic acid chain
F
| Protein |
Nucleic acid |
| 7 (T) |
424 (C) |
| 36 (Q) |
424 (C) |
| 37 (S) |
425 (C) |
| 40 (T) |
425 (C) |
| 43 (Q) |
424 (C) |
| 47 (R) |
423 (T) |
| 50 (R) |
422 (A) |