Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1c9b
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
D
| Protein |
Nucleic acid |
| 154 (R) |
103 (C) |
| 178 (K) |
115 (C) |
| 189 (K) |
104 (C) |
| 248 (R) |
114 (G) |
| 249 (S) |
114 (G) |
| 252 (S) |
114 (G) |
| 281 (A) |
115 (C) |
| 284 (T) |
115 (C) |
Interactions between protein chain A and nucleic acid chain
G
| Protein |
Nucleic acid |
| 146 (Y) |
4 (C) |
| 153 (G) |
1 (G) |
| 156 (N) |
3 (G) |
Interactions between protein chain A and nucleic acid chain
K
| Protein |
Nucleic acid |
| 271 (Q) |
18 (G) |
| 272 (K) |
18 (G) |
Interactions between protein chain B and nucleic acid chain
C
| Protein |
Nucleic acid |
| 216 (S) |
15 (G) |
| 294 (R) |
11 (A) |
| 313 (T) |
11 (A) |
Interactions between protein chain B and nucleic acid chain
D
| Protein |
Nucleic acid |
| 196 (R) |
107 (T) |
| 203 (R) |
108 (T) |
| 210 (T) |
108 (T) |
| 307 (S) |
112 (A) |
Interactions between protein chain E and nucleic acid chain
C
| Protein |
Nucleic acid |
| 271 (Q) |
18 (G) |
Interactions between protein chain E and nucleic acid chain
G
| Protein |
Nucleic acid |
| 189 (K) |
8 (T) |
| 196 (K) |
10 (T) |
| 290 (R) |
2 (G) |
Interactions between protein chain E and nucleic acid chain
H
| Protein |
Nucleic acid |
| 154 (R) |
102 (C) |
| 154 (R) |
103 (C) |
| 178 (K) |
115 (C) |
| 189 (K) |
104 (C) |
| 248 (R) |
114 (G) |
| 249 (S) |
114 (G) |
| 252 (S) |
114 (G) |
| 281 (A) |
115 (C) |
| 284 (T) |
115 (C) |
Interactions between protein chain E and nucleic acid chain
O
| Protein |
Nucleic acid |
| 153 (G) |
1 (G) |
| 156 (N) |
3 (G) |
Interactions between protein chain F and nucleic acid chain
G
| Protein |
Nucleic acid |
| 216 (S) |
15 (G) |
| 294 (R) |
11 (A) |
| 313 (T) |
11 (A) |
Interactions between protein chain F and nucleic acid chain
H
| Protein |
Nucleic acid |
| 196 (R) |
107 (T) |
| 203 (R) |
108 (T) |
| 208 (R) |
109 (T) |
| 210 (T) |
108 (T) |
| 307 (S) |
112 (A) |
Interactions between protein chain I and nucleic acid chain
C
| Protein |
Nucleic acid |
| 153 (G) |
1 (G) |
| 156 (N) |
3 (G) |
Interactions between protein chain I and nucleic acid chain
K
| Protein |
Nucleic acid |
| 189 (K) |
8 (T) |
| 196 (K) |
10 (T) |
| 290 (R) |
2 (G) |
Interactions between protein chain I and nucleic acid chain
L
| Protein |
Nucleic acid |
| 154 (R) |
102 (C) |
| 154 (R) |
103 (C) |
| 178 (K) |
115 (C) |
| 193 (R) |
104 (C) |
| 248 (R) |
114 (G) |
| 249 (S) |
114 (G) |
| 252 (S) |
114 (G) |
| 281 (A) |
115 (C) |
| 284 (T) |
115 (C) |
Interactions between protein chain J and nucleic acid chain
K
| Protein |
Nucleic acid |
| 216 (S) |
15 (G) |
| 294 (R) |
11 (A) |
| 313 (T) |
11 (A) |
Interactions between protein chain J and nucleic acid chain
L
| Protein |
Nucleic acid |
| 196 (R) |
107 (T) |
| 210 (T) |
107 (T) |
| 307 (S) |
112 (A) |
Interactions between protein chain M and nucleic acid chain
G
| Protein |
Nucleic acid |
| 259 (Y) |
18 (G) |
| 270 (T) |
18 (G) |
| 271 (Q) |
18 (G) |
Interactions between protein chain M and nucleic acid chain
O
| Protein |
Nucleic acid |
| 189 (K) |
8 (T) |
| 196 (K) |
10 (T) |
Interactions between protein chain M and nucleic acid chain
P
| Protein |
Nucleic acid |
| 154 (R) |
102 (C) |
| 154 (R) |
103 (C) |
| 178 (K) |
115 (C) |
| 249 (S) |
114 (G) |
| 252 (S) |
114 (G) |
| 281 (A) |
115 (C) |
| 284 (T) |
115 (C) |
Interactions between protein chain N and nucleic acid chain
O
| Protein |
Nucleic acid |
| 216 (S) |
15 (G) |
| 294 (R) |
11 (A) |
| 313 (T) |
11 (A) |
Interactions between protein chain N and nucleic acid chain
P
| Protein |
Nucleic acid |
| 167 (N) |
108 (T) |
| 203 (R) |
108 (T) |
| 210 (T) |
108 (T) |
| 307 (S) |
112 (A) |
| 309 (K) |
111 (T) |
Interactions between protein chain Q and nucleic acid chain
S
| Protein |
Nucleic acid |
| 189 (K) |
8 (T) |
| 196 (K) |
10 (T) |
Interactions between protein chain Q and nucleic acid chain
T
| Protein |
Nucleic acid |
| 154 (R) |
103 (C) |
| 178 (K) |
115 (C) |
| 189 (K) |
104 (C) |
| 248 (R) |
114 (G) |
| 249 (S) |
114 (G) |
| 252 (S) |
114 (G) |
| 281 (A) |
115 (C) |
| 284 (T) |
115 (C) |
Interactions between protein chain R and nucleic acid chain
S
| Protein |
Nucleic acid |
| 216 (S) |
15 (G) |
| 294 (R) |
10 (T) |
| 313 (T) |
11 (A) |
Interactions between protein chain R and nucleic acid chain
T
| Protein |
Nucleic acid |
| 167 (N) |
109 (T) |
| 196 (R) |
107 (T) |
| 210 (T) |
108 (T) |
| 307 (S) |
112 (A) |