Graphical representation of interactions between protein and
nucleotide chains in PDB structure 1by4
Protein chain - blue,
nucleotide chain - red.
Interactions between protein chain A and nucleotide chain
E
| Protein |
Nucleotide |
| 1209 (
R
) |
1498 (G) |
Interactions between protein chain A and nucleotide chain
F
| Protein |
Nucleotide |
| 1161 (
R
) |
1539 (T) |
| 1161 (
R
) |
1540 (G) |
| 1185 (
N
) |
1540 (G) |
| 1188 (
Q
) |
1539 (T) |
| 1191 (
R
) |
1540 (G) |
Interactions between protein chain B and nucleotide chain
E
| Protein |
Nucleotide |
| 1245 (
K
) |
1502 (A) |
| 1247 (
Y
) |
1504 (G) |
| 1256 (
K
) |
1504 (G) |
| 1264 (
R
) |
1504 (G) |
| 1264 (
R
) |
1505 (G) |
| 1306 (
Q
) |
1504 (G) |
Interactions between protein chain B and nucleotide chain
F
| Protein |
Nucleotide |
| 1253 (
E
) |
1535 (C) |
| 1261 (
R
) |
1532 (T) |
| 1261 (
R
) |
1533 (G) |
| 1284 (
R
) |
1533 (G) |
| 1285 (
N
) |
1533 (G) |
| 1288 (
Q
) |
1532 (T) |
| 1291 (
R
) |
1533 (G) |
Interactions between protein chain B and nucleotide chain
G
| Protein |
Nucleotide |
| 1285 (
N
) |
2494 (C) |
| 1286 (
R
) |
2497 (G) |
Interactions between protein chain C and nucleotide chain
G
| Protein |
Nucleotide |
| 2145 (
K
) |
2495 (T) |
| 2156 (
K
) |
2497 (G) |
| 2164 (
R
) |
2498 (G) |
Interactions between protein chain C and nucleotide chain
H
| Protein |
Nucleotide |
| 2161 (
R
) |
2539 (T) |
| 2161 (
R
) |
2540 (G) |
| 2184 (
R
) |
2540 (G) |
| 2185 (
N
) |
2539 (T) |
| 2188 (
Q
) |
2538 (T) |
| 2191 (
R
) |
2540 (G) |
Interactions between protein chain D and nucleotide chain
G
| Protein |
Nucleotide |
| 2245 (
K
) |
2502 (A) |
| 2247 (
Y
) |
2504 (G) |
| 2264 (
R
) |
2505 (G) |
| 2306 (
Q
) |
2504 (G) |
Interactions between protein chain D and nucleotide chain
H
| Protein |
Nucleotide |
| 2253 (
E
) |
2535 (C) |
| 2261 (
R
) |
2532 (T) |
| 2261 (
R
) |
2533 (G) |
| 2284 (
R
) |
2533 (G) |
| 2285 (
N
) |
2533 (G) |
| 2288 (
Q
) |
2532 (T) |
| 2291 (
R
) |
2533 (G) |