Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1bp7
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
1
| Protein |
Nucleic acid |
| 22 (S) |
16 (A) |
| 28 (K) |
19 (G) |
| 44 (Q) |
16 (A) |
| 48 (K) |
14 (A) |
| 70 (R) |
15 (G) |
| 136 (N) |
17 (C) |
| 137 (D) |
16 (A) |
| 142 (K) |
18 (A) |
Interactions between protein chain A and nucleic acid chain
2
| Protein |
Nucleic acid |
| 32 (S) |
2 (G) |
| 33 (Y) |
3 (A) |
| 34 (K) |
2 (G) |
| 38 (Q) |
4 (A) |
| 68 (R) |
8 (G) |
| 81 (I) |
4 (A) |
| 139 (K) |
13 (A) |
Interactions between protein chain B and nucleic acid chain
1
| Protein |
Nucleic acid |
| 33 (Y) |
3 (A) |
| 34 (K) |
2 (C) |
| 38 (Q) |
4 (A) |
| 68 (R) |
8 (G) |
| 81 (I) |
4 (A) |
Interactions between protein chain B and nucleic acid chain
2
| Protein |
Nucleic acid |
| 22 (S) |
16 (A) |
| 28 (K) |
19 (T) |
| 30 (N) |
21 (T) |
| 44 (Q) |
16 (A) |
| 47 (Q) |
14 (C) |
| 48 (K) |
14 (C) |
| 51 (R) |
14 (C) |
| 70 (R) |
15 (G) |
| 136 (N) |
17 (C) |
| 137 (D) |
16 (A) |
| 142 (K) |
18 (G) |
| 143 (T) |
18 (G) |
Interactions between protein chain C and nucleic acid chain
3
| Protein |
Nucleic acid |
| 32 (S) |
2 (C) |
| 33 (Y) |
3 (A) |
| 34 (K) |
2 (C) |
| 38 (Q) |
4 (A) |
| 68 (R) |
8 (G) |
| 81 (I) |
4 (A) |
Interactions between protein chain C and nucleic acid chain
4
| Protein |
Nucleic acid |
| 22 (S) |
16 (A) |
| 28 (K) |
19 (T) |
| 30 (N) |
21 (T) |
| 44 (Q) |
16 (A) |
| 47 (Q) |
14 (C) |
| 48 (K) |
14 (C) |
| 70 (R) |
15 (G) |
| 136 (N) |
17 (C) |
| 137 (D) |
16 (A) |
| 142 (K) |
18 (G) |
| 143 (T) |
18 (G) |
Interactions between protein chain D and nucleic acid chain
3
| Protein |
Nucleic acid |
| 22 (S) |
16 (A) |
| 28 (K) |
19 (G) |
| 44 (Q) |
16 (A) |
| 48 (K) |
14 (A) |
| 70 (R) |
15 (G) |
| 136 (N) |
17 (C) |
| 142 (K) |
18 (A) |
| 143 (T) |
18 (A) |
Interactions between protein chain D and nucleic acid chain
4
| Protein |
Nucleic acid |
| 32 (S) |
2 (G) |
| 33 (Y) |
3 (A) |
| 34 (K) |
2 (G) |
| 38 (Q) |
4 (A) |
| 68 (R) |
8 (G) |
| 81 (I) |
4 (A) |
| 139 (K) |
13 (A) |