Graphical representation of interactions between protein and nucleic acid chains in PDB structure 2irf

Protein chain - blue, nucleic acid chain - red.

Interactions between protein chain G and nucleic acid chain F



Protein Nucleic acid
8 (M) 1134 (C)
64 (K) 1136 (T)
80 (N) 1136 (T)
83 (C) 1136 (T)

Interactions between protein chain H and nucleic acid chain A



Protein Nucleic acid
238 (W) 1004 (T)
241 (A) 1003 (G)
278 (K) 1003 (G)
282 (R) 1004 (T)
282 (R) 1005 (G)
286 (N) 1005 (G)

Interactions between protein chain H and nucleic acid chain F



Protein Nucleic acid
208 (M) 1128 (C)
258 (W) 1129 (T)
264 (K) 1130 (T)
280 (N) 1130 (T)
283 (C) 1130 (T)

Interactions between protein chain I and nucleic acid chain A



Protein Nucleic acid
441 (A) 1009 (G)
475 (K) 1008 (A)
478 (K) 1009 (G)
482 (R) 1011 (G)
486 (N) 1011 (G)

Interactions between protein chain I and nucleic acid chain E



Protein Nucleic acid
408 (M) 1122 (C)
464 (K) 1124 (T)
480 (N) 1124 (T)
483 (C) 1124 (T)

Interactions between protein chain I and nucleic acid chain F



Protein Nucleic acid
443 (R) 1132 (C)
444 (H) 1133 (A)
500 (K) 1130 (T)
500 (K) 1131 (T)
502 (G) 1132 (C)

Interactions between protein chain J and nucleic acid chain B



Protein Nucleic acid
638 (W) 1016 (T)
641 (A) 1015 (G)
675 (K) 1014 (A)
678 (K) 1015 (G)
682 (R) 1016 (T)
682 (R) 1017 (G)
686 (N) 1017 (G)
700 (K) 1016 (T)
707 (R) 1016 (T)
707 (R) 1017 (G)

Interactions between protein chain J and nucleic acid chain E



Protein Nucleic acid
608 (M) 1116 (C)
658 (W) 1117 (T)
680 (N) 1118 (T)
683 (C) 1118 (T)

Interactions between protein chain J and nucleic acid chain F



Protein Nucleic acid
701 (K) 1124 (T)

Interactions between protein chain K and nucleic acid chain B



Protein Nucleic acid
841 (A) 1021 (G)
875 (K) 1020 (A)
878 (K) 1021 (G)
882 (R) 1023 (G)
886 (N) 1023 (G)

Interactions between protein chain K and nucleic acid chain D



Protein Nucleic acid
808 (M) 1110 (C)
864 (K) 1112 (T)
880 (N) 1112 (T)
883 (C) 1112 (T)

Interactions between protein chain K and nucleic acid chain E



Protein Nucleic acid
844 (H) 1121 (A)
900 (K) 1119 (T)
902 (G) 1120 (C)

Interactions between protein chain L and nucleic acid chain C



Protein Nucleic acid
2038 (W) 1028 (T)
2041 (A) 1027 (G)
2075 (K) 1027 (G)
2078 (K) 1027 (G)
2082 (R) 1028 (T)
2082 (R) 1029 (G)
2086 (N) 1029 (G)

Interactions between protein chain L and nucleic acid chain D



Protein Nucleic acid
2008 (M) 1104 (C)
2058 (W) 1105 (T)
2064 (K) 1106 (T)
2080 (N) 1106 (T)
2083 (C) 1106 (T)

Interactions between protein chain L and nucleic acid chain E



Protein Nucleic acid
2043 (R) 1114 (C)