Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 2irf
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain G and nucleic acid chain
F
| Protein |
Nucleic acid |
| 8 (M) |
1134 (C) |
| 64 (K) |
1136 (T) |
| 80 (N) |
1136 (T) |
| 83 (C) |
1136 (T) |
Interactions between protein chain H and nucleic acid chain
A
| Protein |
Nucleic acid |
| 238 (W) |
1004 (T) |
| 241 (A) |
1003 (G) |
| 278 (K) |
1003 (G) |
| 282 (R) |
1004 (T) |
| 282 (R) |
1005 (G) |
| 286 (N) |
1005 (G) |
Interactions between protein chain H and nucleic acid chain
F
| Protein |
Nucleic acid |
| 208 (M) |
1128 (C) |
| 258 (W) |
1129 (T) |
| 264 (K) |
1130 (T) |
| 280 (N) |
1130 (T) |
| 283 (C) |
1130 (T) |
Interactions between protein chain I and nucleic acid chain
A
| Protein |
Nucleic acid |
| 441 (A) |
1009 (G) |
| 475 (K) |
1008 (A) |
| 478 (K) |
1009 (G) |
| 482 (R) |
1011 (G) |
| 486 (N) |
1011 (G) |
Interactions between protein chain I and nucleic acid chain
E
| Protein |
Nucleic acid |
| 408 (M) |
1122 (C) |
| 464 (K) |
1124 (T) |
| 480 (N) |
1124 (T) |
| 483 (C) |
1124 (T) |
Interactions between protein chain I and nucleic acid chain
F
| Protein |
Nucleic acid |
| 443 (R) |
1132 (C) |
| 444 (H) |
1133 (A) |
| 500 (K) |
1130 (T) |
| 500 (K) |
1131 (T) |
| 502 (G) |
1132 (C) |
Interactions between protein chain J and nucleic acid chain
B
| Protein |
Nucleic acid |
| 638 (W) |
1016 (T) |
| 641 (A) |
1015 (G) |
| 675 (K) |
1014 (A) |
| 678 (K) |
1015 (G) |
| 682 (R) |
1016 (T) |
| 682 (R) |
1017 (G) |
| 686 (N) |
1017 (G) |
| 700 (K) |
1016 (T) |
| 707 (R) |
1016 (T) |
| 707 (R) |
1017 (G) |
Interactions between protein chain J and nucleic acid chain
E
| Protein |
Nucleic acid |
| 608 (M) |
1116 (C) |
| 658 (W) |
1117 (T) |
| 680 (N) |
1118 (T) |
| 683 (C) |
1118 (T) |
Interactions between protein chain J and nucleic acid chain
F
| Protein |
Nucleic acid |
| 701 (K) |
1124 (T) |
Interactions between protein chain K and nucleic acid chain
B
| Protein |
Nucleic acid |
| 841 (A) |
1021 (G) |
| 875 (K) |
1020 (A) |
| 878 (K) |
1021 (G) |
| 882 (R) |
1023 (G) |
| 886 (N) |
1023 (G) |
Interactions between protein chain K and nucleic acid chain
D
| Protein |
Nucleic acid |
| 808 (M) |
1110 (C) |
| 864 (K) |
1112 (T) |
| 880 (N) |
1112 (T) |
| 883 (C) |
1112 (T) |
Interactions between protein chain K and nucleic acid chain
E
| Protein |
Nucleic acid |
| 844 (H) |
1121 (A) |
| 900 (K) |
1119 (T) |
| 902 (G) |
1120 (C) |
Interactions between protein chain L and nucleic acid chain
C
| Protein |
Nucleic acid |
| 2038 (W) |
1028 (T) |
| 2041 (A) |
1027 (G) |
| 2075 (K) |
1027 (G) |
| 2078 (K) |
1027 (G) |
| 2082 (R) |
1028 (T) |
| 2082 (R) |
1029 (G) |
| 2086 (N) |
1029 (G) |
Interactions between protein chain L and nucleic acid chain
D
| Protein |
Nucleic acid |
| 2008 (M) |
1104 (C) |
| 2058 (W) |
1105 (T) |
| 2064 (K) |
1106 (T) |
| 2080 (N) |
1106 (T) |
| 2083 (C) |
1106 (T) |
Interactions between protein chain L and nucleic acid chain
E
| Protein |
Nucleic acid |
| 2043 (R) |
1114 (C) |