Graphical representation of interactions between protein and
nucleic acid chains in PDB structure 1trr
Protein chain - blue,
nucleic acid chain - red.
Interactions between protein chain A and nucleic acid chain
C
| Protein |
Nucleic acid |
| 54 (R) |
7 (A) |
| 54 (R) |
8 (C) |
| 78 (G) |
9 (T) |
| 81 (T) |
9 (T) |
| 84 (R) |
7 (A) |
Interactions between protein chain A and nucleic acid chain
I
| Protein |
Nucleic acid |
| 15 (R) |
17 (T) |
| 44 (T) |
15 (G) |
| 68 (Q) |
5 (G) |
| 68 (Q) |
6 (T) |
| 86 (S) |
6 (T) |
| 87 (N) |
7 (A) |
| 90 (K) |
6 (T) |
Interactions between protein chain B and nucleic acid chain
C
| Protein |
Nucleic acid |
| 44 (T) |
7 (A) |
Interactions between protein chain B and nucleic acid chain
I
| Protein |
Nucleic acid |
| 54 (R) |
15 (G) |
| 54 (R) |
16 (C) |
| 76 (G) |
17 (T) |
| 78 (G) |
17 (T) |
| 81 (T) |
17 (T) |
| 84 (R) |
15 (G) |
Interactions between protein chain D and nucleic acid chain
F
| Protein |
Nucleic acid |
| 54 (R) |
7 (A) |
| 54 (R) |
8 (C) |
| 78 (G) |
9 (T) |
| 81 (T) |
9 (T) |
| 84 (R) |
7 (A) |
Interactions between protein chain D and nucleic acid chain
L
| Protein |
Nucleic acid |
| 2 (A) |
15 (G) |
| 15 (R) |
17 (T) |
| 44 (T) |
15 (G) |
| 68 (Q) |
5 (G) |
| 68 (Q) |
6 (T) |
| 86 (S) |
6 (T) |
| 87 (N) |
7 (A) |
| 90 (K) |
6 (T) |
Interactions between protein chain E and nucleic acid chain
C
| Protein |
Nucleic acid |
| 68 (Q) |
13 (A) |
| 68 (Q) |
14 (C) |
| 69 (R) |
13 (A) |
| 86 (S) |
14 (C) |
| 87 (N) |
15 (G) |
| 90 (K) |
14 (C) |
Interactions between protein chain E and nucleic acid chain
F
| Protein |
Nucleic acid |
| 44 (T) |
7 (A) |
Interactions between protein chain E and nucleic acid chain
L
| Protein |
Nucleic acid |
| 54 (R) |
15 (G) |
| 54 (R) |
16 (C) |
| 76 (G) |
17 (T) |
| 78 (G) |
17 (T) |
| 81 (T) |
17 (T) |
| 84 (R) |
15 (G) |
Interactions between protein chain G and nucleic acid chain
C
| Protein |
Nucleic acid |
| 15 (R) |
17 (T) |
| 44 (T) |
15 (G) |
| 68 (Q) |
6 (T) |
| 86 (S) |
6 (T) |
| 87 (N) |
7 (A) |
| 90 (K) |
6 (T) |
Interactions between protein chain G and nucleic acid chain
I
| Protein |
Nucleic acid |
| 54 (R) |
7 (A) |
| 54 (R) |
8 (C) |
| 78 (G) |
9 (T) |
| 81 (T) |
9 (T) |
| 84 (R) |
7 (A) |
Interactions between protein chain H and nucleic acid chain
C
| Protein |
Nucleic acid |
| 54 (R) |
16 (C) |
| 76 (G) |
17 (T) |
| 78 (G) |
17 (T) |
| 81 (T) |
17 (T) |
| 84 (R) |
15 (G) |
Interactions between protein chain H and nucleic acid chain
I
| Protein |
Nucleic acid |
| 44 (T) |
7 (A) |
Interactions between protein chain H and nucleic acid chain
L
| Protein |
Nucleic acid |
| 68 (Q) |
13 (A) |
| 68 (Q) |
14 (C) |
| 69 (R) |
13 (A) |
| 86 (S) |
14 (C) |
| 87 (N) |
15 (G) |
| 90 (K) |
14 (C) |
Interactions between protein chain J and nucleic acid chain
F
| Protein |
Nucleic acid |
| 15 (R) |
17 (T) |
| 44 (T) |
15 (G) |
| 68 (Q) |
6 (T) |
| 86 (S) |
6 (T) |
| 87 (N) |
7 (A) |
| 90 (K) |
6 (T) |
Interactions between protein chain J and nucleic acid chain
L
| Protein |
Nucleic acid |
| 54 (R) |
7 (A) |
| 54 (R) |
8 (C) |
| 78 (G) |
9 (T) |
| 81 (T) |
9 (T) |
| 84 (R) |
7 (A) |
Interactions between protein chain K and nucleic acid chain
F
| Protein |
Nucleic acid |
| 54 (R) |
16 (C) |
| 78 (G) |
17 (T) |
| 81 (T) |
17 (T) |
| 84 (R) |
15 (G) |
Interactions between protein chain K and nucleic acid chain
L
| Protein |
Nucleic acid |
| 44 (T) |
7 (A) |
Interactions between protein chain M and nucleic acid chain
C
| Protein |
Nucleic acid |
| 109 (W) |
8 (C) |
Interactions between protein chain N and nucleic acid chain
I
| Protein |
Nucleic acid |
| 109 (W) |
16 (C) |
Interactions between protein chain O and nucleic acid chain
F
| Protein |
Nucleic acid |
| 109 (W) |
8 (C) |
Interactions between protein chain P and nucleic acid chain
L
| Protein |
Nucleic acid |
| 109 (W) |
16 (C) |
Interactions between protein chain Q and nucleic acid chain
I
| Protein |
Nucleic acid |
| 109 (W) |
8 (C) |
Interactions between protein chain R and nucleic acid chain
C
| Protein |
Nucleic acid |
| 109 (W) |
16 (C) |
Interactions between protein chain S and nucleic acid chain
L
| Protein |
Nucleic acid |
| 109 (W) |
8 (C) |
Interactions between protein chain T and nucleic acid chain
F
| Protein |
Nucleic acid |
| 109 (W) |
16 (C) |