Graphical representation of interactions between protein and nucleic acid chains in PDB structure 1kog

Protein chain - blue, nucleic acid chain - red.

Interactions between protein chain A and nucleic acid chain I



Protein Nucleic acid
249 (K) 99 (C)
249 (K) 100 (U)
548 (T) 84 (U)
575 (N) 83 (U)
577 (K) 89 (U)
609 (R) 87 (U)

Interactions between protein chain A and nucleic acid chain J



Protein Nucleic acid
344 (G) 98 (A)
347 (S) 79 (A)
348 (Y) 80 (U)
349 (R) 80 (U)
500 (E) 79 (A)
502 (N) 78 (G)

Interactions between protein chain B and nucleic acid chain I



Protein Nucleic acid
344 (G) 98 (A)
347 (S) 79 (A)
348 (Y) 80 (U)
349 (R) 79 (A)
349 (R) 80 (U)
500 (E) 79 (A)
502 (N) 78 (G)
504 (R) 96 (C)

Interactions between protein chain B and nucleic acid chain J



Protein Nucleic acid
249 (K) 99 (C)
249 (K) 100 (U)
548 (T) 84 (U)
575 (N) 83 (U)
577 (K) 89 (U)
609 (R) 87 (U)

Interactions between protein chain C and nucleic acid chain K



Protein Nucleic acid
249 (K) 99 (C)
547 (I) 85 (C)
549 (D) 84 (U)
575 (N) 83 (U)
599 (K) 86 (G)
600 (E) 86 (G)
609 (R) 87 (U)

Interactions between protein chain C and nucleic acid chain L



Protein Nucleic acid
344 (G) 98 (A)
347 (S) 79 (A)
348 (Y) 80 (U)
500 (E) 79 (A)
502 (N) 78 (G)
502 (N) 79 (A)

Interactions between protein chain D and nucleic acid chain K



Protein Nucleic acid
342 (N) 98 (A)
344 (G) 98 (A)
347 (S) 79 (A)
348 (Y) 80 (U)
349 (R) 79 (A)
349 (R) 80 (U)
500 (E) 79 (A)
502 (N) 78 (G)
502 (N) 95 (A)
504 (R) 96 (C)

Interactions between protein chain D and nucleic acid chain L



Protein Nucleic acid
246 (K) 101 (G)
249 (K) 99 (C)
249 (K) 100 (U)
548 (T) 84 (U)
575 (N) 83 (U)
577 (K) 89 (U)
599 (K) 86 (G)
609 (R) 87 (U)

Interactions between protein chain E and nucleic acid chain M



Protein Nucleic acid
246 (K) 101 (G)
249 (K) 99 (C)
548 (T) 84 (U)
549 (D) 84 (U)
599 (K) 86 (G)
600 (E) 86 (G)
609 (R) 87 (U)
609 (R) 88 (G)

Interactions between protein chain E and nucleic acid chain N



Protein Nucleic acid
347 (S) 79 (A)
348 (Y) 80 (U)
349 (R) 80 (U)
500 (E) 79 (A)

Interactions between protein chain F and nucleic acid chain M



Protein Nucleic acid
344 (G) 98 (A)
347 (S) 79 (A)
348 (Y) 80 (U)
349 (R) 80 (U)
500 (E) 79 (A)

Interactions between protein chain F and nucleic acid chain N



Protein Nucleic acid
246 (K) 100 (U)
246 (K) 101 (G)
548 (T) 84 (U)
577 (K) 89 (U)
599 (K) 86 (G)
600 (E) 86 (G)

Interactions between protein chain G and nucleic acid chain O



Protein Nucleic acid
246 (K) 100 (U)
246 (K) 101 (G)
548 (T) 84 (U)
549 (D) 84 (U)
577 (K) 89 (U)
599 (K) 86 (G)
600 (E) 86 (G)
609 (R) 87 (U)
609 (R) 88 (G)

Interactions between protein chain H and nucleic acid chain P



Protein Nucleic acid
548 (T) 84 (U)
549 (D) 84 (U)
577 (K) 89 (U)
599 (K) 86 (G)
609 (R) 87 (U)
609 (R) 88 (G)