Graphical representation of interactions between protein and nucleic acid chains in PDB structure 1k78

Protein chain - blue, nucleic acid chain - red.

Interactions between protein chain A and nucleic acid chain C



Protein Nucleic acid
29 (N) 16 (G)
52 (C) 9 (G)
52 (C) 10 (A)
56 (R) 9 (G)
62 (H) 11 (G)
66 (S) 11 (G)
85 (G) 20 (C)
86 (S) 21 (A)
89 (K) 23 (T)
90 (V) 23 (T)
91 (A) 23 (T)
131 (S) 24 (G)
133 (S) 25 (G)
134 (S) 24 (G)
137 (R) 23 (T)

Interactions between protein chain A and nucleic acid chain D



Protein Nucleic acid
22 (Q) 17 (A)
22 (Q) 18 (T)
30 (G) 13 (G)
33 (L) 15 (C)
38 (R) 15 (C)
61 (S) 16 (C)
71 (R) 14 (C)
81 (G) 14 (C)
84 (G) 12 (A)
85 (G) 10 (G)
85 (G) 11 (G)
111 (A) 2 (A)
136 (N) 2 (A)

Interactions between protein chain A and nucleic acid chain H



Protein Nucleic acid
115 (R) 27 (C)

Interactions between protein chain B and nucleic acid chain C



Protein Nucleic acid
391 (R) 9 (G)
394 (R) 8 (G)
397 (Y) 7 (C)
409 (R) 5 (G)

Interactions between protein chain B and nucleic acid chain D



Protein Nucleic acid
337 (L) 18 (T)
375 (W) 19 (C)
379 (K) 19 (C)
388 (K) 20 (T)
396 (Y) 18 (T)

Interactions between protein chain E and nucleic acid chain G



Protein Nucleic acid
29 (N) 16 (G)
50 (R) 10 (A)
52 (C) 9 (G)
52 (C) 10 (A)
56 (R) 9 (G)
62 (H) 11 (G)
66 (S) 11 (G)
85 (G) 20 (C)
86 (S) 21 (A)
89 (K) 23 (T)
90 (V) 23 (T)
91 (A) 23 (T)
131 (S) 24 (G)
133 (S) 25 (G)
134 (S) 24 (G)

Interactions between protein chain E and nucleic acid chain H



Protein Nucleic acid
22 (Q) 17 (A)
22 (Q) 18 (T)
30 (G) 13 (G)
33 (L) 15 (C)
38 (R) 15 (C)
61 (S) 16 (C)
64 (C) 15 (C)
81 (G) 14 (C)
84 (G) 12 (A)
85 (G) 10 (G)
111 (A) 2 (A)
112 (W) 1 (A)

Interactions between protein chain F and nucleic acid chain G



Protein Nucleic acid
391 (R) 9 (G)
394 (R) 8 (G)
397 (Y) 7 (C)
409 (R) 6 (C)

Interactions between protein chain F and nucleic acid chain H



Protein Nucleic acid
337 (L) 18 (T)
375 (W) 19 (C)
388 (K) 20 (T)
396 (Y) 18 (T)

Interactions between protein chain I and nucleic acid chain C



Protein Nucleic acid
85 (G) 24 (G)
111 (A) 16 (G)
136 (N) 16 (G)
140 (R) 17 (C)

Interactions between protein chain I and nucleic acid chain D



Protein Nucleic acid
86 (S) 7 (A)
89 (K) 9 (T)
90 (V) 9 (T)
91 (A) 9 (T)
131 (S) 10 (G)
133 (S) 11 (G)
134 (S) 10 (G)
137 (R) 10 (G)