Graphical representation of interactions between protein and nucleic acid chains in PDB structure 1i3j

Protein chain - blue, nucleic acid chain - red.

Interactions between protein chain A and nucleic acid chain B



Protein Nucleic acid
170 (R) 5 (T)
172 (G) 8 (G)
179 (N) 9 (T)
180 (H) 9 (T)
182 (H) 9 (T)
182 (H) 10 (C)
191 (S) 12 (A)
196 (G) 13 (C)
201 (N) 14 (C)
203 (K) 15 (G)
203 (K) 16 (T)
215 (A) 15 (G)
216 (A) 15 (G)
220 (R) 14 (C)
230 (T) 16 (T)
234 (K) 17 (T)
242 (Y) 16 (T)

Interactions between protein chain A and nucleic acid chain C



Protein Nucleic acid
162 (Y) 50 (G)
165 (S) 51 (A)
168 (R) 48 (A)
176 (S) 48 (A)
182 (H) 45 (C)
200 (S) 41 (T)
201 (N) 40 (G)
225 (S) 34 (T)
231 (Y) 32 (A)
232 (R) 33 (T)
237 (K) 32 (A)