Graphical representation of interactions between protein and nucleic acid chains in PDB structure 1flo

Protein chain - blue, nucleic acid chain - red.

Interactions between protein chain A and nucleic acid chain E



Protein Nucleic acid
3 (Q) -10 (C)
62 (T) -9 (T)
66 (N) -8 (A)
170 (R) -16 (A)
170 (R) -14 (G)
174 (T) -14 (G)
178 (Y) -14 (G)
223 (K) -5 (C)
278 (N) -12 (T)
282 (S) -13 (T)
285 (K) -13 (T)

Interactions between protein chain A and nucleic acid chain F



Protein Nucleic acid
47 (H) 5 (G)
53 (K) 6 (A)
56 (T) 6 (A)
60 (Y) 5 (G)
82 (K) 5 (G)
84 (Q) 4 (A)
193 (S) 7 (A)
193 (S) 8 (T)
281 (R) 11 (G)
284 (N) 9 (A)
300 (N) 10 (G)
303 (K) 9 (A)
304 (S) 9 (A)
305 (H) 9 (A)

Interactions between protein chain A and nucleic acid chain J



Protein Nucleic acid
331 (S) -2 (T)

Interactions between protein chain B and nucleic acid chain G



Protein Nucleic acid
3 (Q) -10 (C)
62 (T) -9 (T)
66 (N) -8 (A)
170 (R) -16 (A)
170 (R) -14 (G)
174 (T) -14 (G)
178 (Y) -14 (G)
223 (K) -5 (C)
278 (N) -12 (T)
282 (S) -13 (T)
285 (K) -13 (T)

Interactions between protein chain B and nucleic acid chain H



Protein Nucleic acid
47 (H) 5 (G)
53 (K) 6 (A)
56 (T) 6 (A)
60 (Y) 5 (G)
82 (K) 5 (G)
84 (Q) 4 (A)
193 (S) 7 (A)
193 (S) 8 (T)
281 (R) 11 (G)
284 (N) 9 (A)
299 (K) 11 (G)
300 (N) 10 (G)
303 (K) 9 (A)
304 (S) 9 (A)
305 (H) 9 (A)

Interactions between protein chain B and nucleic acid chain L



Protein Nucleic acid
331 (S) -2 (T)

Interactions between protein chain C and nucleic acid chain G



Protein Nucleic acid
343 (Y) -5 (C)

Interactions between protein chain C and nucleic acid chain H



Protein Nucleic acid
331 (S) -2 (T)
333 (K) -2 (T)

Interactions between protein chain C and nucleic acid chain I



Protein Nucleic acid
62 (T) -9 (T)
170 (R) -16 (A)
170 (R) -14 (G)
174 (T) -14 (G)
223 (K) -5 (C)
278 (N) -12 (T)
285 (K) -14 (G)
289 (K) -15 (A)

Interactions between protein chain C and nucleic acid chain J



Protein Nucleic acid
47 (H) 5 (G)
56 (T) 6 (A)
60 (Y) 5 (G)
82 (K) 5 (G)
84 (Q) 3 (A)
84 (Q) 4 (A)
192 (F) 8 (T)
193 (S) 7 (A)
193 (S) 8 (T)
281 (R) 11 (G)
300 (N) 10 (G)
303 (K) 9 (A)
304 (S) 9 (A)
305 (H) 9 (A)

Interactions between protein chain D and nucleic acid chain F



Protein Nucleic acid
223 (K) -3 (T)
331 (S) -2 (T)

Interactions between protein chain D and nucleic acid chain K



Protein Nucleic acid
62 (T) -9 (T)
170 (R) -16 (A)
170 (R) -15 (A)
170 (R) -14 (G)
174 (T) -14 (G)
223 (K) -5 (C)
278 (N) -12 (T)
285 (K) -14 (G)
289 (K) -15 (A)

Interactions between protein chain D and nucleic acid chain L



Protein Nucleic acid
47 (H) 5 (G)
56 (T) 6 (A)
60 (Y) 5 (G)
82 (K) 5 (G)
84 (Q) 3 (A)
84 (Q) 4 (A)
192 (F) 8 (T)
193 (S) 8 (T)
281 (R) 11 (G)
300 (N) 10 (G)
303 (K) 9 (A)
303 (K) 10 (G)
304 (S) 9 (A)
305 (H) 9 (A)