Graphical representation of interactions between protein and nucleotide chains in PDB structure 1by4

Protein chain - blue, nucleotide chain - red.

Interactions between protein chain A and nucleotide chain E



Protein Nucleotide
1209 ( R ) 1498 (G)

Interactions between protein chain A and nucleotide chain F



Protein Nucleotide
1161 ( R ) 1539 (T)
1161 ( R ) 1540 (G)
1185 ( N ) 1540 (G)
1188 ( Q ) 1539 (T)
1191 ( R ) 1540 (G)

Interactions between protein chain B and nucleotide chain E



Protein Nucleotide
1245 ( K ) 1502 (A)
1247 ( Y ) 1504 (G)
1256 ( K ) 1504 (G)
1264 ( R ) 1504 (G)
1264 ( R ) 1505 (G)
1306 ( Q ) 1504 (G)

Interactions between protein chain B and nucleotide chain F



Protein Nucleotide
1253 ( E ) 1535 (C)
1261 ( R ) 1532 (T)
1261 ( R ) 1533 (G)
1284 ( R ) 1533 (G)
1285 ( N ) 1533 (G)
1288 ( Q ) 1532 (T)
1291 ( R ) 1533 (G)

Interactions between protein chain B and nucleotide chain G



Protein Nucleotide
1285 ( N ) 2494 (C)
1286 ( R ) 2497 (G)

Interactions between protein chain C and nucleotide chain G



Protein Nucleotide
2145 ( K ) 2495 (T)
2156 ( K ) 2497 (G)
2164 ( R ) 2498 (G)

Interactions between protein chain C and nucleotide chain H



Protein Nucleotide
2161 ( R ) 2539 (T)
2161 ( R ) 2540 (G)
2184 ( R ) 2540 (G)
2185 ( N ) 2539 (T)
2188 ( Q ) 2538 (T)
2191 ( R ) 2540 (G)

Interactions between protein chain D and nucleotide chain G



Protein Nucleotide
2245 ( K ) 2502 (A)
2247 ( Y ) 2504 (G)
2264 ( R ) 2505 (G)
2306 ( Q ) 2504 (G)

Interactions between protein chain D and nucleotide chain H



Protein Nucleotide
2253 ( E ) 2535 (C)
2261 ( R ) 2532 (T)
2261 ( R ) 2533 (G)
2284 ( R ) 2533 (G)
2285 ( N ) 2533 (G)
2288 ( Q ) 2532 (T)
2291 ( R ) 2533 (G)